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Syllabus Computerized Analysis Visualization of Biologica - 81852
עברית
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Last update 02-03-2022
HU Credits: 3

Degree/Cycle: 2nd degree (Master)

Responsible Department: Bio-Medical Sciences

Semester: 2nd Semester

Teaching Languages: Hebrew

Campus: Ein Karem

Course/Module Coordinator: Yoav Smith

Coordinator Email: yoavs@ekmd.huji.ac.il

Coordinator Office Hours: by appointment

Teaching Staff:
Dr. Yotam Drier,
Dr. Yoav Smith

Course/Module description:
Familarity with tools enabling aquisition of data from variable scientific data sources (microarrays,images..)and their analysis for visualization ,quantification and scientific interpretation.

Course/Module aims:
Provide students with tools for aquiring wide sources of scientific data and using a wide span of algorithms and methods for analysis ,via a personal project carried out through the semester.

Learning outcomes - On successful completion of this module, students should be able to:
Ability to analyze bioinformatic data,images and other scientific data using syatistical tools and advanced algorithms writing scripts in MATLAB.

Attendance requirements(%):
90

Teaching arrangement and method of instruction: Following an introduction to writing scripts in MATLAB and using MATLAB TOOLBOXES creating a personal project for analyzing visualizing and interperting data.

Course/Module Content:
Week 1-3 familarity with MATLAB and MATLAB TOOL BOXES
Week 4-end of semester:Creating a personal project sysnchronized with meeting with the teacher.

Required Reading:
Digital Image Processing Using MATLAB (DIPUM)
by Gonzalez, Woods, and Eddins, Prentice Hall © 2004
Paper per each project.

Additional Reading Material:
Exploratory Data Analysis with Matlab by Wendy and Angel Martinez, 2004

Course/Module evaluation:
End of year written/oral examination 0 %
Presentation 0 %
Participation in Tutorials 0 %
Project work 0 %
Assignments 0 %
Reports 0 %
Research project 100 %
Quizzes 0 %
Other 0 %

Additional information:
 
Students needing academic accommodations based on a disability should contact the Center for Diagnosis and Support of Students with Learning Disabilities, or the Office for Students with Disabilities, as early as possible, to discuss and coordinate accommodations, based on relevant documentation.
For further information, please visit the site of the Dean of Students Office.
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